LiceBase GBrowse

 

 

Browser Select Tracks Snapshots Community Tracks Custom Tracks Preferences

 Search

 Search

Landmark or Region: Examples: scaffold1000_size72005.	Download Decorated FASTA File Download Protein Sequence File Download Sequence File Download Spliced Coding Sequence File Download Track Data
Data Source Atlantic salmon louse genome (LSalAtl2s) Tigriopus kingsejongensis genome	Scroll/Zoom:     Show 50 kbp Show 44.49 kbp Show 20 kbp Show 10 kbp Show 5 kbp Show 2 kbp Show 1 kbp Show 200 bp Show 100 bp     Flip

The following 14 regions match your request.

 

scaffold1346_size46090

 

scaffold556_size137522

 

scaffold794_size96255

 

scaffold152_size304267

 

scaffold1007_size71567

 

scaffold184_size276635

 

scaffold564_size136232

 

scaffold402_size181965

 

scaffold781_size98004

 

scaffold1054_size66621

 

 

scaffold1800_size27594

 

scaffold42_size484952

 

scaffold511_size151351

Name	Type	Description	Position	Match Score
spt transcription factor family member	gene	-	scaffold1346_size46090:8159..9422	n/a
spt transcription factor family member	gene	-	scaffold556_size137522:128101..130290	n/a
spt transcription factor family member	gene	-	scaffold794_size96255:45180..49561	n/a
spt transcription factor family member	gene	-	scaffold152_size304267:296117..304433	n/a
spt transcription factor family member	gene	-	scaffold1007_size71567:75..44568	n/a
spt transcription factor family member	gene	P:peptide cross-linking	scaffold184_size276635:269412..271541	n/a
spt transcription factor family member	gene	P:peptide cross-linking	scaffold564_size136232:42736..47843	n/a
spt transcription factor family member	gene	-	scaffold402_size181965:67237..93240	n/a
spt transcription factor family member	gene	-	scaffold781_size98004:50373..51968	n/a
spt transcription factor family member	gene	-	scaffold1054_size66621:48172..50442	n/a
spt transcription factor family member	gene	-	scaffold1800_size27594:7712..9396	n/a
spt transcription factor family member	gene	P:peptide cross-linking	scaffold1800_size27594:15594..16892	n/a
spt transcription factor family member	gene	P:peptide cross-linking	scaffold42_size484952:184844..198699	n/a
spt transcription factor family member	gene	-	scaffold511_size151351:4788..9071	n/a

<< Back to Browser Show Active Tracks Only Show Favorites Only Clear All Favorites

 Tracks

 Tracks

 

 General

 General

 All on All off 

DNA/GC Content

 Genes 

 Genes 

 Coding

 Coding

 All on All off 

CDS [?]

Maker Genes [?]

 RNA

 RNA

 All on All off 

Noncoding RNAs

tRNAs [?]

 Transcript

 Transcript

 All on All off 

transcripts [?]

 Other 

 Other 

 Repeats

 Repeats

 All on All off 

Repeats

 Region 

 Region 

 Region

 Region

 All on All off 

GC Content

 Translation

 Translation

 All on All off 

3-frame translation (forward)

3-frame translation (reverse)

6-frame translation

Snapshots

Snapshot Name

Snapshot Timestamp [GMT]

Community Tracks

Filter: Showing 0 files.

There are no available unused public available tracks. Select "Custom Tracks" to see ones you've already added to your session.

Custom Tracks

[Help with uploading custom tracks]

There are no tracks yet.

Add custom tracks : [From text] [From a URL] [From a file]

Show grid	Image Width 450 640 800 1024 1280 1600 1800 2000 2400	Highlight feature(s) (feature1 feature2...) Clear highlighting
Cache tracks		Highlight regions (region1:start..end region2:start..end) Clear highlighting
Show tooltips		Region Size (bp) 20000 10000 5000 1000

The Generic Genome Browser. For questions about the data at this site, please contact its webmaster (admin@licebase.org). For support of the browser software only, send email to gmod-gbrowse@lists.sourceforge.net or visit the GMOD Project web pages.